Histone Demethylases

Publication Title: 
BMC complementary and alternative medicine

BACKGROUND: Extracts of Sasa senanensis Rehder are used in traditional Japanese medicine; however, little is known about the underlying mechanisms of their potential health benefits. METHODS: S. senanensis leaves were extracted with subcritical water. An active small-molecule was isolated using reversed-phase high-performance liquid chromatography (HPLC), and identified as 3,4-dihydroxybenzaldehyde (protocatechuic aldehyde or PA). The effects of PA on the activity of histone demethylase, the Drosophila melanogaster lifespan and gene expression in Drosophila S2 cells were investigated.

Nakagawa-Yagi, Yuzo
Sato, Yukiko
Matsumoto, Emi
Nakatsuka, Shin-Ichi
Sakaki, Tsuyoshi
Muramatsu, Yukiko
Hara, Takaaki
Aigaki, Toshiro
Publication Title: 
Bioscience, Biotechnology, and Biochemistry

The chronological lifespan (CLS) of budding yeast is a model for the aging of post-mitotic cells in higher eukaryotes. We report here the development of a new method to assess yeast CLS. The new assay is simple, convenient and labor-saving. We applied this new method to screen natural compounds isolated from mushrooms and discovered beauveriolide I as a potent anti-aging agent.

Nakaya, Shigeru
Mizuno, Saki
Ishigami, Hiroki
Yamakawa, Yasuhiro
Kawagishi, Hirokazu
Ushimaru, Takashi
Publication Title: 
Progress in Brain Research

There are numerous examples of sex differences in brain and behavior and in susceptibility to a broad range of brain diseases. For example, gene expression is sexually dimorphic during brain development, adult life, and aging. These differences are orchestrated by the interplay between genetic, hormonal, and environmental influences. However, the molecular mechanisms that underpin these differences have not been fully elucidated.

Qureshi, Irfan A.
Mehler, Mark F.
Publication Title: 

Alzheimer' s disease (AD) is the most common form of dementia causing an increasing emotional and economical burden to our societies. Although much progress has been made regarding the molecular mechanisms that underlie AD pathogenesis effective therapies are not available yet. The emerging field of neuroepigenetics has provided evidence that de-regulation of epigenetic processes play a role in AD.

Fischer, Andre
Publication Title: 
Molecular Cell

Histone H3K4 demethylase LSD1 plays an important role in stem cell biology, especially in the maintenance of the silencing of differentiation genes. However, how the function of LSD1 is regulated and the differentiation genes are derepressed are not understood. Here, we report that elimination of LSD1 promotes embryonic stem cell (ESC) differentiation toward neural lineage. We showed that the destabilization of LSD1 occurs posttranscriptionally via the ubiquitin-proteasome pathway by an E3 ubiquitin ligase, Jade-2.

Han, Xiao
Gui, Bin
Xiong, Cong
Zhao, Linnan
Liang, Jing
Sun, Luyang
Yang, Xiaohan
Yu, Wenhua
Si, Wenzhe
Yan, Ruorong
Yi, Xia
Zhang, Di
Li, Wanjin
Li, Lifang
Yang, Jianguo
Wang, Yan
Sun, Yi Eve
Zhang, Dai
Meng, Anming
Shang, Yongfeng
Publication Title: 
Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences

The growing list of mutations implicated in monogenic disorders of the developing brain includes at least seven genes (ARX, CUL4B, KDM5A, KDM5C, KMT2A, KMT2C, KMT2D) with loss-of-function mutations affecting proper regulation of histone H3 lysine 4 methylation, a chromatin mark which on a genome-wide scale is broadly associated with active gene expression, with its mono-, di- and trimethylated forms differentially enriched at promoter and enhancer and other regulatory sequences.

Shen, Erica
Shulha, Hennady
Weng, Zhiping
Akbarian, Schahram
Publication Title: 
PloS One

Aging in organisms as diverse as yeast, nematodes, and mammals is delayed by caloric restriction, an effect mediated by the nutrient sensing TOR, RAS/cAMP, and AKT/Sch9 pathways. The transcription factor Gis1 functions downstream of these pathways in extending the lifespan of nutrient restricted yeast cells, but the mechanisms involved are still poorly understood. We have used gene expression microarrays to study the targets of Gis1 and the related protein Rph1 in different growth phases.

Orzechowski Westholm, Jakub
Tronnersjö, Susanna
Nordberg, Niklas
Olsson, Ida
Komorowski, Jan
Ronne, Hans
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